Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Krt28A6BLY7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Krt28A6BLY7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.6■■□□□ 1.53
Krt28A6BLY7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Krt28A6BLY7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.59■■□□□ 1.53
Krt28A6BLY7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Krt28A6BLY7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Krt28A6BLY7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Krt28A6BLY7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Krt28A6BLY7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Krt28A6BLY7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Krt28A6BLY7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.57■■□□□ 1.52
Krt28A6BLY7 Gm10399-202ENSMUST00000202768 748 ntBASIC24.57■■□□□ 1.52
Krt28A6BLY7 Gm45417-201ENSMUST00000209533 758 ntBASIC24.57■■□□□ 1.52
Krt28A6BLY7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
Krt28A6BLY7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Krt28A6BLY7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Krt28A6BLY7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Krt28A6BLY7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
Krt28A6BLY7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Krt28A6BLY7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.55■■□□□ 1.52
Krt28A6BLY7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Krt28A6BLY7 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.55■■□□□ 1.52
Krt28A6BLY7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Krt28A6BLY7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Krt28A6BLY7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Krt28A6BLY7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Krt28A6BLY7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Krt28A6BLY7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Krt28A6BLY7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Krt28A6BLY7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Krt28A6BLY7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.53■■□□□ 1.52
Krt28A6BLY7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Krt28A6BLY7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Krt28A6BLY7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Krt28A6BLY7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Krt28A6BLY7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Krt28A6BLY7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.52■■□□□ 1.52
Krt28A6BLY7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Krt28A6BLY7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.52■■□□□ 1.52
Krt28A6BLY7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Krt28A6BLY7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Krt28A6BLY7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Krt28A6BLY7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Krt28A6BLY7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Krt28A6BLY7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Krt28A6BLY7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Krt28A6BLY7 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.51■■□□□ 1.51
Krt28A6BLY7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
Krt28A6BLY7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Krt28A6BLY7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Krt28A6BLY7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Krt28A6BLY7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Krt28A6BLY7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Krt28A6BLY7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Krt28A6BLY7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Krt28A6BLY7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Krt28A6BLY7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Krt28A6BLY7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Krt28A6BLY7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Krt28A6BLY7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Krt28A6BLY7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.49■■□□□ 1.51
Krt28A6BLY7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Krt28A6BLY7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Krt28A6BLY7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Krt28A6BLY7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Krt28A6BLY7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Krt28A6BLY7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Krt28A6BLY7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Krt28A6BLY7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Krt28A6BLY7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.46■■□□□ 1.51
Krt28A6BLY7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.46■■□□□ 1.51
Krt28A6BLY7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Krt28A6BLY7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Krt28A6BLY7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Krt28A6BLY7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Krt28A6BLY7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Krt28A6BLY7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Krt28A6BLY7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Krt28A6BLY7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Krt28A6BLY7 Golgb1-201ENSMUST00000023534 498 ntBASIC24.45■■□□□ 1.5
Krt28A6BLY7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Krt28A6BLY7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Krt28A6BLY7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Krt28A6BLY7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Krt28A6BLY7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Krt28A6BLY7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.44■■□□□ 1.5
Krt28A6BLY7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.44■■□□□ 1.5
Krt28A6BLY7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.44■■□□□ 1.5
Krt28A6BLY7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
Krt28A6BLY7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Krt28A6BLY7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Krt28A6BLY7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Krt28A6BLY7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
Krt28A6BLY7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Krt28A6BLY7 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.42■■□□□ 1.5
Krt28A6BLY7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.42■■□□□ 1.5
Krt28A6BLY7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Krt28A6BLY7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Krt28A6BLY7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms