Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc9bA3KGF9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9bA3KGF9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccdc9bA3KGF9 Gm43566-201ENSMUST00000196851 808 ntBASIC19.5■□□□□ 0.71
Ccdc9bA3KGF9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9bA3KGF9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9bA3KGF9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Ccdc9bA3KGF9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9bA3KGF9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9bA3KGF9 Gm13238-201ENSMUST00000117655 780 ntBASIC19.49■□□□□ 0.71
Ccdc9bA3KGF9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.49■□□□□ 0.71
Ccdc9bA3KGF9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9bA3KGF9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.49■□□□□ 0.71
Ccdc9bA3KGF9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9bA3KGF9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ccdc9bA3KGF9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc9bA3KGF9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Ccdc9bA3KGF9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9bA3KGF9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9bA3KGF9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9bA3KGF9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
Ccdc9bA3KGF9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9bA3KGF9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9bA3KGF9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9bA3KGF9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9bA3KGF9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc9bA3KGF9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9bA3KGF9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9bA3KGF9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc9bA3KGF9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc9bA3KGF9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc9bA3KGF9 Gm44428-201ENSMUST00000204474 874 ntBASIC19.45■□□□□ 0.7
Ccdc9bA3KGF9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc9bA3KGF9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9bA3KGF9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9bA3KGF9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9bA3KGF9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc9bA3KGF9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc9bA3KGF9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9bA3KGF9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9bA3KGF9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc9bA3KGF9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc9bA3KGF9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Gm9959-201ENSMUST00000068277 390 ntBASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc9bA3KGF9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9bA3KGF9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc9bA3KGF9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9bA3KGF9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc9bA3KGF9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9bA3KGF9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9bA3KGF9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9bA3KGF9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9bA3KGF9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9bA3KGF9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc9bA3KGF9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9bA3KGF9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc9bA3KGF9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9bA3KGF9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9bA3KGF9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ccdc9bA3KGF9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9bA3KGF9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc9bA3KGF9 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.39■□□□□ 0.69
Ccdc9bA3KGF9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9bA3KGF9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9bA3KGF9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc9bA3KGF9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc9bA3KGF9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.38■□□□□ 0.69
Ccdc9bA3KGF9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9bA3KGF9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9bA3KGF9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9bA3KGF9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms