Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-2A0A0G2JF93 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-2A0A0G2JF93 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-2A0A0G2JF93 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-2A0A0G2JF93 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-2A0A0G2JF93 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-2A0A0G2JF93 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-2A0A0G2JF93 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-2A0A0G2JF93 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Trav13n-2A0A0G2JF93 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-2A0A0G2JF93 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-2A0A0G2JF93 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav13n-2A0A0G2JF93 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav13n-2A0A0G2JF93 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-2A0A0G2JF93 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-2A0A0G2JF93 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13n-2A0A0G2JF93 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-2A0A0G2JF93 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trav13n-2A0A0G2JF93 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trav13n-2A0A0G2JF93 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-2A0A0G2JF93 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.33□□□□□ -0.11
Trav13n-2A0A0G2JF93 Gm4419-202ENSMUST00000226239 1431 ntBASIC14.33□□□□□ -0.11
Trav13n-2A0A0G2JF93 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-2A0A0G2JF93 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav13n-2A0A0G2JF93 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-2A0A0G2JF93 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-2A0A0G2JF93 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trav13n-2A0A0G2JF93 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-2A0A0G2JF93 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-2A0A0G2JF93 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-2A0A0G2JF93 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-2A0A0G2JF93 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-2A0A0G2JF93 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-2A0A0G2JF93 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-2A0A0G2JF93 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-2A0A0G2JF93 Notumos-201ENSMUST00000151998 2659 ntBASIC14.31□□□□□ -0.12
Trav13n-2A0A0G2JF93 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-2A0A0G2JF93 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav13n-2A0A0G2JF93 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-2A0A0G2JF93 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav13n-2A0A0G2JF93 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-2A0A0G2JF93 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.29□□□□□ -0.12
Trav13n-2A0A0G2JF93 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav13n-2A0A0G2JF93 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav13n-2A0A0G2JF93 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav13n-2A0A0G2JF93 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-2A0A0G2JF93 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-2A0A0G2JF93 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-2A0A0G2JF93 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-2A0A0G2JF93 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-2A0A0G2JF93 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-2A0A0G2JF93 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13n-2A0A0G2JF93 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trav13n-2A0A0G2JF93 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13n-2A0A0G2JF93 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav13n-2A0A0G2JF93 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-2A0A0G2JF93 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav13n-2A0A0G2JF93 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-2A0A0G2JF93 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav13n-2A0A0G2JF93 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav13n-2A0A0G2JF93 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-2A0A0G2JF93 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav13n-2A0A0G2JF93 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-2A0A0G2JF93 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trav13n-2A0A0G2JF93 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-2A0A0G2JF93 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-2A0A0G2JF93 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav13n-2A0A0G2JF93 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-2A0A0G2JF93 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-2A0A0G2JF93 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 9517.8 ms