Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav3n-3A0A0G2JEM0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.34■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav3n-3A0A0G2JEM0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.32■□□□□ 0.2
Trav3n-3A0A0G2JEM0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.32■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav3n-3A0A0G2JEM0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.31■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav3n-3A0A0G2JEM0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Nkain2-201ENSMUST00000092602 558 ntBASIC16.27■□□□□ 0.2
Trav3n-3A0A0G2JEM0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav3n-3A0A0G2JEM0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3n-3A0A0G2JEM0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.24■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms