Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9n-2A0A0G2JDP3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Gm11175-201ENSMUST00000116172 543 ntBASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-2A0A0G2JDP3 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.73■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Gm27502-201ENSMUST00000183495 199 ntBASIC15.71■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9n-2A0A0G2JDP3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-2A0A0G2JDP3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.69■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-2A0A0G2JDP3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9n-2A0A0G2JDP3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms