Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sirpb1aA0A0A6YYP6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sirpb1aA0A0A6YYP6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.57■□□□□ 0.88
Sirpb1aA0A0A6YYP6 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.57■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Gm9812-201ENSMUST00000061934 968 ntBASIC20.57■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sirpb1aA0A0A6YYP6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.56■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1aA0A0A6YYP6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.56■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.55■□□□□ 0.88
Sirpb1aA0A0A6YYP6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sirpb1aA0A0A6YYP6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.54■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1aA0A0A6YYP6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.52■□□□□ 0.88
Sirpb1aA0A0A6YYP6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.52■□□□□ 0.88
Sirpb1aA0A0A6YYP6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
Sirpb1aA0A0A6YYP6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.51■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.51■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.49■□□□□ 0.87
Sirpb1aA0A0A6YYP6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.48■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sirpb1aA0A0A6YYP6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sirpb1aA0A0A6YYP6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.48■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sirpb1aA0A0A6YYP6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.47■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.47■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Mir3960-201ENSMUST00000198213 73 ntBASIC20.46■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Terc-201ENSMUST00000082862 423 ntBASIC20.46■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Sirpb1aA0A0A6YYP6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sirpb1aA0A0A6YYP6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sirpb1aA0A0A6YYP6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sirpb1aA0A0A6YYP6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sirpb1aA0A0A6YYP6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms