Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv23A0A0A6YWQ1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv23A0A0A6YWQ1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trbv23A0A0A6YWQ1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv23A0A0A6YWQ1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv23A0A0A6YWQ1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Trbv23A0A0A6YWQ1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv23A0A0A6YWQ1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv23A0A0A6YWQ1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv23A0A0A6YWQ1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trbv23A0A0A6YWQ1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.61■□□□□ 0.57
Trbv23A0A0A6YWQ1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv23A0A0A6YWQ1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv23A0A0A6YWQ1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv23A0A0A6YWQ1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv23A0A0A6YWQ1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv23A0A0A6YWQ1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv23A0A0A6YWQ1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv23A0A0A6YWQ1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv23A0A0A6YWQ1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.6■□□□□ 0.57
Trbv23A0A0A6YWQ1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv23A0A0A6YWQ1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv23A0A0A6YWQ1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv23A0A0A6YWQ1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv23A0A0A6YWQ1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trbv23A0A0A6YWQ1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv23A0A0A6YWQ1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trbv23A0A0A6YWQ1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv23A0A0A6YWQ1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv23A0A0A6YWQ1 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.58■□□□□ 0.57
Trbv23A0A0A6YWQ1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trbv23A0A0A6YWQ1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv23A0A0A6YWQ1 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.58■□□□□ 0.56
Trbv23A0A0A6YWQ1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv23A0A0A6YWQ1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv23A0A0A6YWQ1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv23A0A0A6YWQ1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv23A0A0A6YWQ1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.57■□□□□ 0.56
Trbv23A0A0A6YWQ1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv23A0A0A6YWQ1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv23A0A0A6YWQ1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trbv23A0A0A6YWQ1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv23A0A0A6YWQ1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.56■□□□□ 0.56
Trbv23A0A0A6YWQ1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.56■□□□□ 0.56
Trbv23A0A0A6YWQ1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv23A0A0A6YWQ1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Trbv23A0A0A6YWQ1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv23A0A0A6YWQ1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv23A0A0A6YWQ1 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.55■□□□□ 0.56
Trbv23A0A0A6YWQ1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv23A0A0A6YWQ1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv23A0A0A6YWQ1 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.55■□□□□ 0.56
Trbv23A0A0A6YWQ1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv23A0A0A6YWQ1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv23A0A0A6YWQ1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv23A0A0A6YWQ1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv23A0A0A6YWQ1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv23A0A0A6YWQ1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv23A0A0A6YWQ1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trbv23A0A0A6YWQ1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv23A0A0A6YWQ1 Gm4799-201ENSMUST00000095396 657 ntBASIC18.54■□□□□ 0.56
Trbv23A0A0A6YWQ1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv23A0A0A6YWQ1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv23A0A0A6YWQ1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv23A0A0A6YWQ1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv23A0A0A6YWQ1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.53■□□□□ 0.56
Trbv23A0A0A6YWQ1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv23A0A0A6YWQ1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv23A0A0A6YWQ1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv23A0A0A6YWQ1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv23A0A0A6YWQ1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv23A0A0A6YWQ1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv23A0A0A6YWQ1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv23A0A0A6YWQ1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv23A0A0A6YWQ1 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.52■□□□□ 0.56
Trbv23A0A0A6YWQ1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv23A0A0A6YWQ1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv23A0A0A6YWQ1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.52■□□□□ 0.55
Trbv23A0A0A6YWQ1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.51■□□□□ 0.55
Trbv23A0A0A6YWQ1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv23A0A0A6YWQ1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv23A0A0A6YWQ1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv23A0A0A6YWQ1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv23A0A0A6YWQ1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv23A0A0A6YWQ1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv23A0A0A6YWQ1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv23A0A0A6YWQ1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv23A0A0A6YWQ1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trbv23A0A0A6YWQ1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Trbv23A0A0A6YWQ1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.5■□□□□ 0.55
Trbv23A0A0A6YWQ1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv23A0A0A6YWQ1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.49■□□□□ 0.55
Trbv23A0A0A6YWQ1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trbv23A0A0A6YWQ1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv23A0A0A6YWQ1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv23A0A0A6YWQ1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trbv23A0A0A6YWQ1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Trbv23A0A0A6YWQ1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv23A0A0A6YWQ1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv23A0A0A6YWQ1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 1280.8 ms