Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav5-4A0A075B652 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav5-4A0A075B652 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trav5-4A0A075B652 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav5-4A0A075B652 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav5-4A0A075B652 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav5-4A0A075B652 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav5-4A0A075B652 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav5-4A0A075B652 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.05■□□□□ 0.48
Trav5-4A0A075B652 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav5-4A0A075B652 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Trav5-4A0A075B652 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav5-4A0A075B652 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav5-4A0A075B652 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Trav5-4A0A075B652 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav5-4A0A075B652 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.04■□□□□ 0.48
Trav5-4A0A075B652 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav5-4A0A075B652 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav5-4A0A075B652 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-4A0A075B652 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav5-4A0A075B652 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav5-4A0A075B652 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-4A0A075B652 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-4A0A075B652 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-4A0A075B652 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-4A0A075B652 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav5-4A0A075B652 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-4A0A075B652 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav5-4A0A075B652 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav5-4A0A075B652 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav5-4A0A075B652 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav5-4A0A075B652 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Trav5-4A0A075B652 Scarna2-201ENSMUST00000157560 414 ntBASIC18.02■□□□□ 0.48
Trav5-4A0A075B652 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav5-4A0A075B652 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav5-4A0A075B652 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav5-4A0A075B652 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trav5-4A0A075B652 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav5-4A0A075B652 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav5-4A0A075B652 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trav5-4A0A075B652 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-4A0A075B652 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav5-4A0A075B652 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-4A0A075B652 Gm9806-201ENSMUST00000051080 552 ntBASIC18■□□□□ 0.47
Trav5-4A0A075B652 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-4A0A075B652 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-4A0A075B652 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-4A0A075B652 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav5-4A0A075B652 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-4A0A075B652 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-4A0A075B652 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18■□□□□ 0.47
Trav5-4A0A075B652 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-4A0A075B652 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-4A0A075B652 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-4A0A075B652 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-4A0A075B652 Gm16437-201ENSMUST00000025669 507 ntBASIC17.99■□□□□ 0.47
Trav5-4A0A075B652 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-4A0A075B652 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav5-4A0A075B652 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trav5-4A0A075B652 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav5-4A0A075B652 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav5-4A0A075B652 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav5-4A0A075B652 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav5-4A0A075B652 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trav5-4A0A075B652 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.97■□□□□ 0.47
Trav5-4A0A075B652 Gm44428-201ENSMUST00000204474 874 ntBASIC17.97■□□□□ 0.47
Trav5-4A0A075B652 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trav5-4A0A075B652 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav5-4A0A075B652 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav5-4A0A075B652 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trav5-4A0A075B652 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-4A0A075B652 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-4A0A075B652 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-4A0A075B652 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav5-4A0A075B652 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-4A0A075B652 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav5-4A0A075B652 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-4A0A075B652 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-4A0A075B652 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-4A0A075B652 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-4A0A075B652 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-4A0A075B652 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-4A0A075B652 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-4A0A075B652 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.94■□□□□ 0.46
Trav5-4A0A075B652 Gm11687-201ENSMUST00000118911 886 ntBASIC17.94■□□□□ 0.46
Trav5-4A0A075B652 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trav5-4A0A075B652 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-4A0A075B652 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-4A0A075B652 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-4A0A075B652 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-4A0A075B652 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5-4A0A075B652 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav5-4A0A075B652 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5-4A0A075B652 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trav5-4A0A075B652 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5-4A0A075B652 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav5-4A0A075B652 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5-4A0A075B652 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav5-4A0A075B652 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5-4A0A075B652 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms