Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16nA0A075B634 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16nA0A075B634 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav16nA0A075B634 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16nA0A075B634 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16nA0A075B634 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.39■□□□□ 0.21
Trav16nA0A075B634 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav16nA0A075B634 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav16nA0A075B634 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav16nA0A075B634 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav16nA0A075B634 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav16nA0A075B634 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav16nA0A075B634 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Trav16nA0A075B634 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16nA0A075B634 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16nA0A075B634 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16nA0A075B634 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.37■□□□□ 0.21
Trav16nA0A075B634 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.37■□□□□ 0.21
Trav16nA0A075B634 Notumos-201ENSMUST00000151998 2659 ntBASIC16.37■□□□□ 0.21
Trav16nA0A075B634 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16nA0A075B634 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16nA0A075B634 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16nA0A075B634 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav16nA0A075B634 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Trav16nA0A075B634 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav16nA0A075B634 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.36■□□□□ 0.21
Trav16nA0A075B634 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav16nA0A075B634 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav16nA0A075B634 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav16nA0A075B634 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav16nA0A075B634 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16nA0A075B634 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16nA0A075B634 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16nA0A075B634 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav16nA0A075B634 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16nA0A075B634 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16nA0A075B634 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16nA0A075B634 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16nA0A075B634 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16nA0A075B634 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Trav16nA0A075B634 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16nA0A075B634 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav16nA0A075B634 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16nA0A075B634 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16nA0A075B634 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16nA0A075B634 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16nA0A075B634 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav16nA0A075B634 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Trav16nA0A075B634 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trav16nA0A075B634 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav16nA0A075B634 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav16nA0A075B634 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav16nA0A075B634 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav16nA0A075B634 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav16nA0A075B634 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav16nA0A075B634 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav16nA0A075B634 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav16nA0A075B634 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav16nA0A075B634 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav16nA0A075B634 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16nA0A075B634 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav16nA0A075B634 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav16nA0A075B634 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav16nA0A075B634 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav16nA0A075B634 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav16nA0A075B634 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav16nA0A075B634 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav16nA0A075B634 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trav16nA0A075B634 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav16nA0A075B634 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav16nA0A075B634 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav16nA0A075B634 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav16nA0A075B634 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16nA0A075B634 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav16nA0A075B634 Gm22567-201ENSMUST00000175542 342 ntBASIC16.29■□□□□ 0.2
Trav16nA0A075B634 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16nA0A075B634 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16nA0A075B634 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16nA0A075B634 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16nA0A075B634 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trav16nA0A075B634 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav16nA0A075B634 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16nA0A075B634 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav16nA0A075B634 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav16nA0A075B634 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav16nA0A075B634 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav16nA0A075B634 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav16nA0A075B634 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trav16nA0A075B634 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms