Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.32□□□□□ -0.12
Speer3W4VSP1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Gm16198-201ENSMUST00000118766 670 ntBASIC14.32□□□□□ -0.12
Speer3W4VSP1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Speer3W4VSP1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Speer3W4VSP1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gm44492-201ENSMUST00000197012 141 ntBASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.31□□□□□ -0.12
Speer3W4VSP1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.31□□□□□ -0.12
Speer3W4VSP1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gm10478-201ENSMUST00000084451 396 ntBASIC14.31□□□□□ -0.12
Speer3W4VSP1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Speer3W4VSP1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.3□□□□□ -0.12
Speer3W4VSP1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.3□□□□□ -0.12
Speer3W4VSP1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Speer3W4VSP1 Gm16026-204ENSMUST00000162652 683 ntBASIC14.3□□□□□ -0.12
Speer3W4VSP1 Gm5264-201ENSMUST00000190584 848 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms