Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.74□□□□□ -0.69
PdfS4R2K0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Gm14140-201ENSMUST00000119999 995 ntBASIC10.74□□□□□ -0.69
PdfS4R2K0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Gm27646-201ENSMUST00000183989 110 ntBASIC10.74□□□□□ -0.69
PdfS4R2K0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.74□□□□□ -0.69
PdfS4R2K0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Gm8000-201ENSMUST00000188378 592 ntBASIC10.74□□□□□ -0.69
PdfS4R2K0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.74□□□□□ -0.69
PdfS4R2K0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.74□□□□□ -0.69
PdfS4R2K0 AW822252-206ENSMUST00000208904 237 ntBASIC10.74□□□□□ -0.69
PdfS4R2K0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.74□□□□□ -0.69
PdfS4R2K0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.74□□□□□ -0.69
PdfS4R2K0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Gm15590-201ENSMUST00000078419 552 ntBASIC10.74□□□□□ -0.69
PdfS4R2K0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.73□□□□□ -0.69
PdfS4R2K0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Gm5364-201ENSMUST00000216789 889 ntBASIC10.73□□□□□ -0.69
PdfS4R2K0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.73□□□□□ -0.69
PdfS4R2K0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.73□□□□□ -0.69
PdfS4R2K0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.73□□□□□ -0.69
PdfS4R2K0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PdfS4R2K0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.72□□□□□ -0.69
PdfS4R2K0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms