Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Gm29127-201ENSMUST00000188304 517 ntBASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Gm38144-201ENSMUST00000192790 465 ntBASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Gm43630-201ENSMUST00000201550 776 ntBASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Gm9755-201ENSMUST00000032981 1356 ntBASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Gm28182-201ENSMUST00000188354 2477 ntBASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf1Q9EPU4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Gm4984-201ENSMUST00000115987 360 ntBASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Gm8652-201ENSMUST00000181363 964 ntBASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Sybu-209ENSMUST00000228639 4113 ntBASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Cpsf1Q9EPU4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Gm6152-201ENSMUST00000151704 340 ntBASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf1Q9EPU4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf1Q9EPU4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms