Protein–RNA interactions for Protein: Q9CQX0

Otub2, Ubiquitin thioesterase OTUB2, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub2Q9CQX0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Gm8927-201ENSMUST00000181978 981 ntBASIC13.54□□□□□ -0.24
Otub2Q9CQX0 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.54□□□□□ -0.24
Otub2Q9CQX0 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Gm3222-201ENSMUST00000071282 990 ntBASIC13.54□□□□□ -0.24
Otub2Q9CQX0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otub2Q9CQX0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Gm14127-201ENSMUST00000117906 678 ntBASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Gm11524-201ENSMUST00000119349 807 ntBASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Gm19078-201ENSMUST00000206311 727 ntBASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otub2Q9CQX0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otub2Q9CQX0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.52□□□□□ -0.24
Otub2Q9CQX0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Otub2Q9CQX0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Otub2Q9CQX0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otub2Q9CQX0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Otub2Q9CQX0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Otub2Q9CQX0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otub2Q9CQX0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Otub2Q9CQX0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otub2Q9CQX0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.52□□□□□ -0.25
Otub2Q9CQX0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.52□□□□□ -0.25
Otub2Q9CQX0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otub2Q9CQX0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms