Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vcpip1Q8CDG3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Gm18889-201ENSMUST00000174284 929 ntBASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.03■□□□□ -0
Vcpip1Q8CDG3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vcpip1Q8CDG3 Gm13365-201ENSMUST00000121188 973 ntBASIC15.02■□□□□ -0
Vcpip1Q8CDG3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms