Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Gm45167-201ENSMUST00000208007 322 ntBASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tsen54Q8C2A2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Psmb5-202ENSMUST00000227257 622 ntBASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tsen54Q8C2A2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tsen54Q8C2A2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms