Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps9d1Q8C190 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Vps9d1Q8C190 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Vps9d1Q8C190 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Vps9d1Q8C190 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps9d1Q8C190 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps9d1Q8C190 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps9d1Q8C190 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vps9d1Q8C190 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps9d1Q8C190 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps9d1Q8C190 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps9d1Q8C190 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps9d1Q8C190 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms