Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.39□□□□□ -0.59
Vma21Q78T54 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Mir8117-201ENSMUST00000184773 107 ntBASIC11.39□□□□□ -0.59
Vma21Q78T54 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.39□□□□□ -0.59
Vma21Q78T54 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.39□□□□□ -0.59
Vma21Q78T54 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.39□□□□□ -0.59
Vma21Q78T54 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Vma21Q78T54 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.38□□□□□ -0.59
Vma21Q78T54 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.38□□□□□ -0.59
Vma21Q78T54 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.38□□□□□ -0.59
Vma21Q78T54 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.38□□□□□ -0.59
Vma21Q78T54 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.38□□□□□ -0.59
Vma21Q78T54 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Vma21Q78T54 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.38□□□□□ -0.59
Vma21Q78T54 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Vma21Q78T54 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Vma21Q78T54 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.38□□□□□ -0.59
Vma21Q78T54 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vma21Q78T54 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Vma21Q78T54 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.37□□□□□ -0.59
Vma21Q78T54 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.37□□□□□ -0.59
Vma21Q78T54 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.37□□□□□ -0.59
Vma21Q78T54 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.37□□□□□ -0.59
Vma21Q78T54 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vma21Q78T54 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms