Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Commd3Q63829 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Commd3Q63829 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Commd3Q63829 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Commd3Q63829 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Commd3Q63829 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Commd3Q63829 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.64□□□□□ -0.55
Commd3Q63829 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Commd3Q63829 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Commd3Q63829 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Commd3Q63829 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Commd3Q63829 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Commd3Q63829 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.63□□□□□ -0.55
Commd3Q63829 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.63□□□□□ -0.55
Commd3Q63829 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Commd3Q63829 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.63□□□□□ -0.55
Commd3Q63829 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Commd3Q63829 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Commd3Q63829 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.63□□□□□ -0.55
Commd3Q63829 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Olfr286-202ENSMUST00000205305 969 ntBASIC11.63□□□□□ -0.55
Commd3Q63829 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Commd3Q63829 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.63□□□□□ -0.55
Commd3Q63829 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.63□□□□□ -0.55
Commd3Q63829 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.63□□□□□ -0.55
Commd3Q63829 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.63□□□□□ -0.55
Commd3Q63829 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Commd3Q63829 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Commd3Q63829 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Commd3Q63829 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Commd3Q63829 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Commd3Q63829 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Commd3Q63829 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Commd3Q63829 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Commd3Q63829 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Commd3Q63829 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Commd3Q63829 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.62□□□□□ -0.55
Commd3Q63829 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Commd3Q63829 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.62□□□□□ -0.55
Commd3Q63829 Gm18246-201ENSMUST00000221023 728 ntBASIC11.62□□□□□ -0.55
Commd3Q63829 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Commd3Q63829 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Commd3Q63829 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.62□□□□□ -0.55
Commd3Q63829 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Commd3Q63829 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Commd3Q63829 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.62□□□□□ -0.55
Commd3Q63829 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.61□□□□□ -0.55
Commd3Q63829 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Commd3Q63829 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Commd3Q63829 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Commd3Q63829 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Commd3Q63829 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Commd3Q63829 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms