Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-3Q5R1C3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-3Q5R1C3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms