Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm7809-201ENSMUST00000153199 742 ntBASIC12.38□□□□□ -0.43
Chd8Q09XV5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm34023-201ENSMUST00000195539 217 ntBASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm43916-201ENSMUST00000205062 967 ntBASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm5950-201ENSMUST00000213337 772 ntBASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm5781-201ENSMUST00000219792 443 ntBASIC12.38□□□□□ -0.43
Chd8Q09XV5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.38□□□□□ -0.43
Chd8Q09XV5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm9062-201ENSMUST00000117712 727 ntBASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm11618-201ENSMUST00000117946 267 ntBASIC12.38□□□□□ -0.43
Chd8Q09XV5 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm7003-201ENSMUST00000195089 312 ntBASIC12.38□□□□□ -0.43
Chd8Q09XV5 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.37□□□□□ -0.43
Chd8Q09XV5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Gm8749-201ENSMUST00000117737 331 ntBASIC12.37□□□□□ -0.43
Chd8Q09XV5 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.37□□□□□ -0.43
Chd8Q09XV5 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chd8Q09XV5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd8Q09XV5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Mt1-202ENSMUST00000211807 1085 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd8Q09XV5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.36□□□□□ -0.43
Chd8Q09XV5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Chd8Q09XV5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms