Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Scn1bP97952 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn1bP97952 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.79□□□□□ -0.36
Scn1bP97952 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn1bP97952 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn1bP97952 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Scn1bP97952 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Scn1bP97952 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn1bP97952 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn1bP97952 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.78□□□□□ -0.36
Scn1bP97952 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.78□□□□□ -0.36
Scn1bP97952 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Scn1bP97952 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.78□□□□□ -0.36
Scn1bP97952 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn1bP97952 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.78□□□□□ -0.36
Scn1bP97952 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Scn1bP97952 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.78□□□□□ -0.36
Scn1bP97952 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.78□□□□□ -0.36
Scn1bP97952 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.78□□□□□ -0.36
Scn1bP97952 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn1bP97952 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Scn1bP97952 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn1bP97952 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn1bP97952 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn1bP97952 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Scn1bP97952 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1bP97952 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn1bP97952 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn1bP97952 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1bP97952 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Scn1bP97952 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
Scn1bP97952 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Scn1bP97952 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1bP97952 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1bP97952 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.77□□□□□ -0.36
Scn1bP97952 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1bP97952 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Scn1bP97952 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1bP97952 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1bP97952 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Scn1bP97952 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.77□□□□□ -0.37
Scn1bP97952 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.77□□□□□ -0.37
Scn1bP97952 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.77□□□□□ -0.37
Scn1bP97952 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn1bP97952 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.77□□□□□ -0.37
Scn1bP97952 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn1bP97952 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.77□□□□□ -0.37
Scn1bP97952 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Scn1bP97952 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms