Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Carlr-201ENSMUST00000181515 2574 ntBASIC11.66□□□□□ -0.54
Abca1P41233 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.66□□□□□ -0.54
Abca1P41233 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Gm45453-201ENSMUST00000211758 853 ntBASIC11.66□□□□□ -0.54
Abca1P41233 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.66□□□□□ -0.54
Abca1P41233 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Abca1P41233 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Abca1P41233 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.66□□□□□ -0.54
Abca1P41233 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Abca1P41233 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.66□□□□□ -0.54
Abca1P41233 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.66□□□□□ -0.54
Abca1P41233 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.66□□□□□ -0.54
Abca1P41233 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Mir1982-201ENSMUST00000157368 74 ntBASIC11.66□□□□□ -0.54
Abca1P41233 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.66□□□□□ -0.54
Abca1P41233 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Abca1P41233 Gm5356-201ENSMUST00000093326 615 ntBASIC11.66□□□□□ -0.54
Abca1P41233 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abca1P41233 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.65□□□□□ -0.54
Abca1P41233 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Abca1P41233 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.65□□□□□ -0.54
Abca1P41233 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Abca1P41233 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.65□□□□□ -0.54
Abca1P41233 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Abca1P41233 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Abca1P41233 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.55
Abca1P41233 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Gm15806-201ENSMUST00000120696 955 ntBASIC11.65□□□□□ -0.55
Abca1P41233 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
Abca1P41233 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Abca1P41233 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
Abca1P41233 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Abca1P41233 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Abca1P41233 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms