Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TpbpaP13438 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TpbpaP13438 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TpbpaP13438 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TpbpaP13438 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TpbpaP13438 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TpbpaP13438 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TpbpaP13438 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.7□□□□□ -0.38
TpbpaP13438 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
TpbpaP13438 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TpbpaP13438 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.69□□□□□ -0.38
TpbpaP13438 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
TpbpaP13438 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.69□□□□□ -0.38
TpbpaP13438 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TpbpaP13438 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
TpbpaP13438 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Matn2-206ENSMUST00000228570 2798 ntBASIC12.69□□□□□ -0.38
TpbpaP13438 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TpbpaP13438 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.69□□□□□ -0.38
TpbpaP13438 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.69□□□□□ -0.38
TpbpaP13438 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TpbpaP13438 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.69□□□□□ -0.38
TpbpaP13438 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
TpbpaP13438 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TpbpaP13438 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TpbpaP13438 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TpbpaP13438 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.68□□□□□ -0.38
TpbpaP13438 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.68□□□□□ -0.38
TpbpaP13438 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
TpbpaP13438 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Gm12350-201ENSMUST00000121208 462 ntBASIC12.68□□□□□ -0.38
TpbpaP13438 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.68□□□□□ -0.38
TpbpaP13438 Gm5479-201ENSMUST00000160578 435 ntBASIC12.68□□□□□ -0.38
TpbpaP13438 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TpbpaP13438 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
TpbpaP13438 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.68□□□□□ -0.38
TpbpaP13438 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
TpbpaP13438 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.68□□□□□ -0.38
TpbpaP13438 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.68□□□□□ -0.38
TpbpaP13438 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TpbpaP13438 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.68□□□□□ -0.38
TpbpaP13438 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TpbpaP13438 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TpbpaP13438 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TpbpaP13438 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TpbpaP13438 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TpbpaP13438 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TpbpaP13438 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TpbpaP13438 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TpbpaP13438 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms