Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc9P09633 Gm8337-201ENSMUST00000187358 1938 ntBASIC18.02■□□□□ 0.47
Hoxc9P09633 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc9P09633 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Hoxc9P09633 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Gm12020-201ENSMUST00000119030 2042 ntBASIC18.01■□□□□ 0.47
Hoxc9P09633 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Hoxc9P09633 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Hoxc9P09633 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC18.01■□□□□ 0.47
Hoxc9P09633 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC18.01■□□□□ 0.47
Hoxc9P09633 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC18.01■□□□□ 0.47
Hoxc9P09633 Gm42929-201ENSMUST00000198374 1286 ntBASIC18.01■□□□□ 0.47
Hoxc9P09633 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Hoxc9P09633 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc9P09633 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18■□□□□ 0.47
Hoxc9P09633 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hoxc9P09633 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Gm2639-201ENSMUST00000156881 1297 ntBASIC18■□□□□ 0.47
Hoxc9P09633 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC18■□□□□ 0.47
Hoxc9P09633 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Rassf8-202ENSMUST00000058538 1131 ntBASIC18■□□□□ 0.47
Hoxc9P09633 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc9P09633 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.99■□□□□ 0.47
Hoxc9P09633 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.99■□□□□ 0.47
Hoxc9P09633 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.99■□□□□ 0.47
Hoxc9P09633 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.99■□□□□ 0.47
Hoxc9P09633 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.99■□□□□ 0.47
Hoxc9P09633 Gm15770-201ENSMUST00000117498 584 ntBASIC17.99■□□□□ 0.47
Hoxc9P09633 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hoxc9P09633 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc9P09633 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.98■□□□□ 0.47
Hoxc9P09633 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hoxc9P09633 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.98■□□□□ 0.47
Hoxc9P09633 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.98■□□□□ 0.47
Hoxc9P09633 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Hoxc9P09633 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hoxc9P09633 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hoxc9P09633 Gm43179-201ENSMUST00000198797 275 ntBASIC17.98■□□□□ 0.47
Hoxc9P09633 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.98■□□□□ 0.47
Hoxc9P09633 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.98■□□□□ 0.47
Hoxc9P09633 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.98■□□□□ 0.47
Hoxc9P09633 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.98■□□□□ 0.47
Hoxc9P09633 Gm26315-201ENSMUST00000083890 321 ntBASIC17.98■□□□□ 0.47
Hoxc9P09633 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.98■□□□□ 0.47
Hoxc9P09633 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms