Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TnfP06804 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.83□□□□□ -0.04
TnfP06804 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TnfP06804 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TnfP06804 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
TnfP06804 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TnfP06804 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
TnfP06804 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TnfP06804 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Mir698-201ENSMUST00000102164 109 ntBASIC14.82□□□□□ -0.04
TnfP06804 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.82□□□□□ -0.04
TnfP06804 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.82□□□□□ -0.04
TnfP06804 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.82□□□□□ -0.04
TnfP06804 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.82□□□□□ -0.04
TnfP06804 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.82□□□□□ -0.04
TnfP06804 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TnfP06804 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.82□□□□□ -0.04
TnfP06804 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TnfP06804 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TnfP06804 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TnfP06804 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
TnfP06804 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Gm15678-201ENSMUST00000117573 960 ntBASIC14.81□□□□□ -0.04
TnfP06804 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.81□□□□□ -0.04
TnfP06804 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.81□□□□□ -0.04
TnfP06804 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.81□□□□□ -0.04
TnfP06804 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.81□□□□□ -0.04
TnfP06804 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.81□□□□□ -0.04
TnfP06804 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.81□□□□□ -0.04
TnfP06804 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.81□□□□□ -0.04
TnfP06804 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.81□□□□□ -0.04
TnfP06804 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TnfP06804 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TnfP06804 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TnfP06804 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.8□□□□□ -0.04
TnfP06804 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.8□□□□□ -0.04
TnfP06804 Gm27701-201ENSMUST00000184498 110 ntBASIC14.8□□□□□ -0.04
TnfP06804 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.8□□□□□ -0.04
TnfP06804 Gm28911-201ENSMUST00000188837 117 ntBASIC14.8□□□□□ -0.04
TnfP06804 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.8□□□□□ -0.04
TnfP06804 Gm19078-201ENSMUST00000206311 727 ntBASIC14.8□□□□□ -0.04
TnfP06804 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.8□□□□□ -0.04
TnfP06804 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.8□□□□□ -0.04
TnfP06804 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.8□□□□□ -0.04
TnfP06804 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.8□□□□□ -0.04
TnfP06804 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.8□□□□□ -0.04
TnfP06804 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.8□□□□□ -0.04
TnfP06804 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms