Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ChkaO54804 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ChkaO54804 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ChkaO54804 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
ChkaO54804 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.14□□□□□ -0.15
ChkaO54804 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.14□□□□□ -0.15
ChkaO54804 Gm14822-201ENSMUST00000122247 291 ntBASIC14.14□□□□□ -0.15
ChkaO54804 Mir1895-201ENSMUST00000122615 79 ntBASIC14.14□□□□□ -0.15
ChkaO54804 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.14□□□□□ -0.15
ChkaO54804 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.14□□□□□ -0.15
ChkaO54804 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Gm45453-201ENSMUST00000211758 853 ntBASIC14.14□□□□□ -0.15
ChkaO54804 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ChkaO54804 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.14□□□□□ -0.15
ChkaO54804 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ChkaO54804 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ChkaO54804 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
ChkaO54804 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.13□□□□□ -0.15
ChkaO54804 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.13□□□□□ -0.15
ChkaO54804 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.13□□□□□ -0.15
ChkaO54804 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.13□□□□□ -0.15
ChkaO54804 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.13□□□□□ -0.15
ChkaO54804 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.13□□□□□ -0.15
ChkaO54804 Gm29541-201ENSMUST00000191351 678 ntBASIC14.13□□□□□ -0.15
ChkaO54804 AA619741-201ENSMUST00000195095 646 ntBASIC14.13□□□□□ -0.15
ChkaO54804 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.13□□□□□ -0.15
ChkaO54804 Gm18049-201ENSMUST00000208909 581 ntBASIC14.13□□□□□ -0.15
ChkaO54804 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.13□□□□□ -0.15
ChkaO54804 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.13□□□□□ -0.15
ChkaO54804 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
ChkaO54804 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.13□□□□□ -0.15
ChkaO54804 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ChkaO54804 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ChkaO54804 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.12□□□□□ -0.15
ChkaO54804 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ChkaO54804 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.12□□□□□ -0.15
ChkaO54804 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.12□□□□□ -0.15
ChkaO54804 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.12□□□□□ -0.15
ChkaO54804 Mir6990-201ENSMUST00000183724 91 ntBASIC14.12□□□□□ -0.15
ChkaO54804 Gm43125-201ENSMUST00000201724 730 ntBASIC14.12□□□□□ -0.15
ChkaO54804 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.12□□□□□ -0.15
ChkaO54804 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ChkaO54804 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.12□□□□□ -0.15
ChkaO54804 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.12□□□□□ -0.15
ChkaO54804 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.12□□□□□ -0.15
ChkaO54804 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Grk6-205ENSMUST00000224653 2976 ntBASIC14.12□□□□□ -0.15
ChkaO54804 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ChkaO54804 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms