Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Efnb3O35393 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.08□□□□□ -0.64
Efnb3O35393 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Efnb3O35393 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.07□□□□□ -0.64
Efnb3O35393 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.07□□□□□ -0.64
Efnb3O35393 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.07□□□□□ -0.64
Efnb3O35393 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.07□□□□□ -0.64
Efnb3O35393 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Efnb3O35393 Gm25925-201ENSMUST00000158314 306 ntBASIC11.07□□□□□ -0.64
Efnb3O35393 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.07□□□□□ -0.64
Efnb3O35393 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.07□□□□□ -0.64
Efnb3O35393 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.07□□□□□ -0.64
Efnb3O35393 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.07□□□□□ -0.64
Efnb3O35393 Psmb5-202ENSMUST00000227257 622 ntBASIC11.07□□□□□ -0.64
Efnb3O35393 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Efnb3O35393 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Efnb3O35393 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.07□□□□□ -0.64
Efnb3O35393 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Efnb3O35393 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.07□□□□□ -0.64
Efnb3O35393 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Efnb3O35393 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Efnb3O35393 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Efnb3O35393 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.06□□□□□ -0.64
Efnb3O35393 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Efnb3O35393 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Efnb3O35393 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Gm14140-201ENSMUST00000119999 995 ntBASIC11.06□□□□□ -0.64
Efnb3O35393 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.06□□□□□ -0.64
Efnb3O35393 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.06□□□□□ -0.64
Efnb3O35393 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Efnb3O35393 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.06□□□□□ -0.64
Efnb3O35393 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.06□□□□□ -0.64
Efnb3O35393 Gm43514-201ENSMUST00000198852 424 ntBASIC11.06□□□□□ -0.64
Efnb3O35393 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.06□□□□□ -0.64
Efnb3O35393 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Efnb3O35393 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Efnb3O35393 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms