Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.73■□□□□ 0.27
Ube4aE9Q735 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.73■□□□□ 0.27
Ube4aE9Q735 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.73■□□□□ 0.27
Ube4aE9Q735 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Gm2445-201ENSMUST00000182798 989 ntBASIC16.72■□□□□ 0.27
Ube4aE9Q735 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.72■□□□□ 0.27
Ube4aE9Q735 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.72■□□□□ 0.27
Ube4aE9Q735 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4aE9Q735 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Gm12742-201ENSMUST00000117326 410 ntBASIC16.71■□□□□ 0.27
Ube4aE9Q735 Gm14660-201ENSMUST00000119809 575 ntBASIC16.71■□□□□ 0.27
Ube4aE9Q735 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.71■□□□□ 0.27
Ube4aE9Q735 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.71■□□□□ 0.27
Ube4aE9Q735 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.71■□□□□ 0.27
Ube4aE9Q735 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4aE9Q735 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ube4aE9Q735 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.7■□□□□ 0.26
Ube4aE9Q735 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.7■□□□□ 0.26
Ube4aE9Q735 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Gm12957-201ENSMUST00000117835 377 ntBASIC16.7■□□□□ 0.26
Ube4aE9Q735 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.7■□□□□ 0.26
Ube4aE9Q735 Gm17330-201ENSMUST00000221047 165 ntBASIC16.7■□□□□ 0.26
Ube4aE9Q735 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.7■□□□□ 0.26
Ube4aE9Q735 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ube4aE9Q735 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.7■□□□□ 0.26
Ube4aE9Q735 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.7■□□□□ 0.26
Ube4aE9Q735 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4aE9Q735 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4aE9Q735 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms