Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.75□□□□□ -0.53
BC048679D3YXE9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.75□□□□□ -0.53
BC048679D3YXE9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.75□□□□□ -0.53
BC048679D3YXE9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.75□□□□□ -0.53
BC048679D3YXE9 Gm15483-201ENSMUST00000120338 456 ntBASIC11.75□□□□□ -0.53
BC048679D3YXE9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Gm5177-201ENSMUST00000183092 997 ntBASIC11.75□□□□□ -0.53
BC048679D3YXE9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.75□□□□□ -0.53
BC048679D3YXE9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.75□□□□□ -0.53
BC048679D3YXE9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
BC048679D3YXE9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.74□□□□□ -0.53
BC048679D3YXE9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.74□□□□□ -0.53
BC048679D3YXE9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.74□□□□□ -0.53
BC048679D3YXE9 Gm27301-201ENSMUST00000184012 127 ntBASIC11.74□□□□□ -0.53
BC048679D3YXE9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Gm2272-201ENSMUST00000194903 582 ntBASIC11.74□□□□□ -0.53
BC048679D3YXE9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.74□□□□□ -0.53
BC048679D3YXE9 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.74□□□□□ -0.53
BC048679D3YXE9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.74□□□□□ -0.53
BC048679D3YXE9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC048679D3YXE9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC048679D3YXE9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms