Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim30cD3YVI9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim30cD3YVI9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim30cD3YVI9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim30cD3YVI9 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.33■□□□□ 0.04
Trim30cD3YVI9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim30cD3YVI9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim30cD3YVI9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim30cD3YVI9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim30cD3YVI9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim30cD3YVI9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Gm5312-201ENSMUST00000203728 547 ntBASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim30cD3YVI9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Gm18737-201ENSMUST00000173594 937 ntBASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.31■□□□□ 0.04
Trim30cD3YVI9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim30cD3YVI9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms