Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Gm1401-201ENSMUST00000122048 772 ntBASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 AA619741-201ENSMUST00000195095 646 ntBASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Gm18057-201ENSMUST00000208220 503 ntBASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Gm18041-201ENSMUST00000218210 618 ntBASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 BC001981-202ENSMUST00000191393 1545 ntBASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Trav12-1A0N8R1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Mir3113-201ENSMUST00000175478 76 ntBASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Mzt1-203ENSMUST00000227948 952 ntBASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-1A0N8R1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms