Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Syt7-204ENSMUST00000223586 1344 ntBASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Gm20445-201ENSMUST00000061905 565 ntBASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubd1Q9R1K7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tubd1Q9R1K7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Gm27772-201ENSMUST00000184900 187 ntBASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms