Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Gm13226-201ENSMUST00000117838 404 ntBASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf1Q9EPU4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Gm15824-201ENSMUST00000119516 955 ntBASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Gm7561-201ENSMUST00000211203 886 ntBASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 AC153962.4-201ENSMUST00000217878 242 ntBASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf1Q9EPU4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Gm27839-201ENSMUST00000184242 106 ntBASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Gm9899-201ENSMUST00000065519 555 ntBASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Mmp14-206ENSMUST00000225641 3238 ntBASIC19.11■□□□□ 0.65
Cpsf1Q9EPU4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Mir692-1-201ENSMUST00000102263 109 ntBASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Gm11425-201ENSMUST00000119608 498 ntBASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 AC125350.2-201ENSMUST00000224737 727 ntBASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Gm9396-201ENSMUST00000076703 567 ntBASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf1Q9EPU4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms