Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Gm37230-201ENSMUST00000194491 818 ntBASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf111Q99ML9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Gm13365-201ENSMUST00000121188 973 ntBASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Gm18737-201ENSMUST00000173594 937 ntBASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Gm18889-201ENSMUST00000174284 929 ntBASIC13.6□□□□□ -0.23
Rnf111Q99ML9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.6□□□□□ -0.23
Rnf111Q99ML9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf111Q99ML9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms