Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.3■□□□□ 0.2
StrcQ8VIM6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.3■□□□□ 0.2
StrcQ8VIM6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Gm8805-201ENSMUST00000117848 313 ntBASIC16.29■□□□□ 0.2
StrcQ8VIM6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.29■□□□□ 0.2
StrcQ8VIM6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.29■□□□□ 0.2
StrcQ8VIM6 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.29■□□□□ 0.2
StrcQ8VIM6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.28■□□□□ 0.2
StrcQ8VIM6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Gm25043-201ENSMUST00000158604 212 ntBASIC16.28■□□□□ 0.2
StrcQ8VIM6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Gm22121-201ENSMUST00000175148 54 ntBASIC16.28■□□□□ 0.2
StrcQ8VIM6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
StrcQ8VIM6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
StrcQ8VIM6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Gm15276-201ENSMUST00000145953 498 ntBASIC16.27■□□□□ 0.2
StrcQ8VIM6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.27■□□□□ 0.2
StrcQ8VIM6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.27■□□□□ 0.2
StrcQ8VIM6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
StrcQ8VIM6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
StrcQ8VIM6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
StrcQ8VIM6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
StrcQ8VIM6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
StrcQ8VIM6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
StrcQ8VIM6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.27■□□□□ 0.19
StrcQ8VIM6 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.27■□□□□ 0.19
StrcQ8VIM6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.26■□□□□ 0.19
StrcQ8VIM6 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
StrcQ8VIM6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
StrcQ8VIM6 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.26■□□□□ 0.19
StrcQ8VIM6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
StrcQ8VIM6 Gm31256-201ENSMUST00000194705 506 ntBASIC16.26■□□□□ 0.19
StrcQ8VIM6 Gm44967-201ENSMUST00000207047 631 ntBASIC16.26■□□□□ 0.19
StrcQ8VIM6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms