Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab11fip3Q8CHD8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab11fip3Q8CHD8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
Rab11fip3Q8CHD8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab11fip3Q8CHD8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.08■□□□□ 0.49
Rab11fip3Q8CHD8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rab11fip3Q8CHD8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab11fip3Q8CHD8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.08■□□□□ 0.49
Rab11fip3Q8CHD8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rab11fip3Q8CHD8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab11fip3Q8CHD8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab11fip3Q8CHD8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Gm12485-201ENSMUST00000119641 291 ntBASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Gm17794-201ENSMUST00000220252 955 ntBASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab11fip3Q8CHD8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms