Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Gm27430-201ENSMUST00000184585 107 ntBASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Gm44333-201ENSMUST00000197168 107 ntBASIC16.47■□□□□ 0.23
Samm50Q8BGH2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.47■□□□□ 0.23
Samm50Q8BGH2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Gm44872-201ENSMUST00000207864 420 ntBASIC16.47■□□□□ 0.23
Samm50Q8BGH2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Gm5779-201ENSMUST00000218467 910 ntBASIC16.47■□□□□ 0.23
Samm50Q8BGH2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Samm50Q8BGH2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Samm50Q8BGH2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Samm50Q8BGH2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Gm45098-201ENSMUST00000207179 657 ntBASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Samm50Q8BGH2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Gm22175-201ENSMUST00000175007 78 ntBASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms