Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Gm27839-201ENSMUST00000184242 106 ntBASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf40bQ80W14 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Gm12341-201ENSMUST00000119724 503 ntBASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Gm8062-201ENSMUST00000139696 444 ntBASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Gm45098-201ENSMUST00000207179 657 ntBASIC16.16■□□□□ 0.18
Prpf40bQ80W14 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.16■□□□□ 0.18
Prpf40bQ80W14 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Gm9257-201ENSMUST00000221254 232 ntBASIC16.16■□□□□ 0.18
Prpf40bQ80W14 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.16■□□□□ 0.18
Prpf40bQ80W14 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.16■□□□□ 0.18
Prpf40bQ80W14 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Gm10478-201ENSMUST00000084451 396 ntBASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf40bQ80W14 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.15■□□□□ 0.18
Prpf40bQ80W14 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms