Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Upf3bQ3ULL6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.02■□□□□ -0
Upf3bQ3ULL6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upf3bQ3ULL6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Gm3436-201ENSMUST00000179930 840 ntBASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Gm7775-201ENSMUST00000218871 853 ntBASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upf3bQ3ULL6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Gm28182-201ENSMUST00000188354 2477 ntBASIC15□□□□□ -0.01
Upf3bQ3ULL6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15□□□□□ -0.01
Upf3bQ3ULL6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Gm27989-201ENSMUST00000184721 107 ntBASIC15□□□□□ -0.01
Upf3bQ3ULL6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Gm43703-201ENSMUST00000200523 763 ntBASIC15□□□□□ -0.01
Upf3bQ3ULL6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Gm18027-201ENSMUST00000218947 619 ntBASIC15□□□□□ -0.01
Upf3bQ3ULL6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 AC154806.6-201ENSMUST00000228192 202 ntBASIC15□□□□□ -0.01
Upf3bQ3ULL6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Upf3bQ3ULL6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Upf3bQ3ULL6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upf3bQ3ULL6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Upf3bQ3ULL6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upf3bQ3ULL6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.99□□□□□ -0.01
Upf3bQ3ULL6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms