Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Gm11539-201ENSMUST00000119837 557 ntBASIC11.53□□□□□ -0.56
Trim63Q38HM4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.53□□□□□ -0.56
Trim63Q38HM4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim63Q38HM4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim63Q38HM4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim63Q38HM4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim63Q38HM4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim63Q38HM4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim63Q38HM4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim63Q38HM4 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.52□□□□□ -0.56
Trim63Q38HM4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim63Q38HM4 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trim63Q38HM4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trim63Q38HM4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Gm12896-201ENSMUST00000118430 226 ntBASIC11.52□□□□□ -0.57
Trim63Q38HM4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.52□□□□□ -0.57
Trim63Q38HM4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.52□□□□□ -0.57
Trim63Q38HM4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Trim63Q38HM4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Map1b-203ENSMUST00000223725 2669 ntBASIC11.52□□□□□ -0.57
Trim63Q38HM4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim63Q38HM4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.51□□□□□ -0.57
Trim63Q38HM4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms