Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Gm4535-201ENSMUST00000182274 558 ntBASIC12.82□□□□□ -0.36
Scn1bP97952 Gm27646-201ENSMUST00000183989 110 ntBASIC12.82□□□□□ -0.36
Scn1bP97952 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Gm10355-201ENSMUST00000097146 517 ntBASIC12.82□□□□□ -0.36
Scn1bP97952 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scn1bP97952 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Scn1bP97952 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.82□□□□□ -0.36
Scn1bP97952 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.82□□□□□ -0.36
Scn1bP97952 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scn1bP97952 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn1bP97952 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn1bP97952 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.81□□□□□ -0.36
Scn1bP97952 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Gm9103-201ENSMUST00000119371 405 ntBASIC12.81□□□□□ -0.36
Scn1bP97952 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Scn1bP97952 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scn1bP97952 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.81□□□□□ -0.36
Scn1bP97952 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Scn1bP97952 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn1bP97952 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Scn1bP97952 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Scn1bP97952 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.81□□□□□ -0.36
Scn1bP97952 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1bP97952 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Scn1bP97952 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Scn1bP97952 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Scn1bP97952 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.8□□□□□ -0.36
Scn1bP97952 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Gm8749-201ENSMUST00000117737 331 ntBASIC12.8□□□□□ -0.36
Scn1bP97952 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.8□□□□□ -0.36
Scn1bP97952 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.8□□□□□ -0.36
Scn1bP97952 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.8□□□□□ -0.36
Scn1bP97952 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Scn1bP97952 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.8□□□□□ -0.36
Scn1bP97952 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.8□□□□□ -0.36
Scn1bP97952 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Scn1bP97952 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1bP97952 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn1bP97952 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn1bP97952 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Scn1bP97952 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn1bP97952 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn1bP97952 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1bP97952 Gm13418-201ENSMUST00000119097 944 ntBASIC12.79□□□□□ -0.36
Scn1bP97952 Gm11780-201ENSMUST00000136880 516 ntBASIC12.79□□□□□ -0.36
Scn1bP97952 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms