Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Gm11543-201ENSMUST00000120758 370 ntBASIC13.81□□□□□ -0.2
Traf6P70196 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.81□□□□□ -0.2
Traf6P70196 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.81□□□□□ -0.2
Traf6P70196 Gm43575-201ENSMUST00000196420 516 ntBASIC13.81□□□□□ -0.2
Traf6P70196 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.81□□□□□ -0.2
Traf6P70196 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.81□□□□□ -0.2
Traf6P70196 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Traf6P70196 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Traf6P70196 Acot6-202ENSMUST00000222921 3622 ntBASIC13.81□□□□□ -0.2
Traf6P70196 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Traf6P70196 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.81□□□□□ -0.2
Traf6P70196 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Traf6P70196 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Traf6P70196 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Traf6P70196 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.8□□□□□ -0.2
Traf6P70196 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.8□□□□□ -0.2
Traf6P70196 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Traf6P70196 Gm2810-201ENSMUST00000118681 990 ntBASIC13.8□□□□□ -0.2
Traf6P70196 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.8□□□□□ -0.2
Traf6P70196 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.8□□□□□ -0.2
Traf6P70196 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.8□□□□□ -0.2
Traf6P70196 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.8□□□□□ -0.2
Traf6P70196 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Gm25007-201ENSMUST00000083808 133 ntBASIC13.8□□□□□ -0.2
Traf6P70196 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.8□□□□□ -0.2
Traf6P70196 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.8□□□□□ -0.2
Traf6P70196 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Traf6P70196 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Traf6P70196 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Traf6P70196 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Traf6P70196 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.8□□□□□ -0.2
Traf6P70196 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Traf6P70196 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Traf6P70196 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.79□□□□□ -0.2
Traf6P70196 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Traf6P70196 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.79□□□□□ -0.2
Traf6P70196 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Traf6P70196 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Traf6P70196 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.79□□□□□ -0.2
Traf6P70196 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.79□□□□□ -0.2
Traf6P70196 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms