Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.34□□□□□ -0.59
Sssca1P56873 Gm13884-201ENSMUST00000118103 829 ntBASIC11.34□□□□□ -0.59
Sssca1P56873 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.34□□□□□ -0.59
Sssca1P56873 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Sssca1P56873 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Sssca1P56873 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.34□□□□□ -0.59
Sssca1P56873 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Sssca1P56873 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.34□□□□□ -0.59
Sssca1P56873 Mir5131-201ENSMUST00000175426 93 ntBASIC11.34□□□□□ -0.59
Sssca1P56873 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sssca1P56873 Gm5177-201ENSMUST00000183092 997 ntBASIC11.34□□□□□ -0.59
Sssca1P56873 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sssca1P56873 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.34□□□□□ -0.59
Sssca1P56873 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Sssca1P56873 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.34□□□□□ -0.59
Sssca1P56873 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.34□□□□□ -0.59
Sssca1P56873 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sssca1P56873 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sssca1P56873 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Sssca1P56873 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Sssca1P56873 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sssca1P56873 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Sssca1P56873 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Sssca1P56873 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sssca1P56873 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.33□□□□□ -0.6
Sssca1P56873 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Gm18195-201ENSMUST00000207604 706 ntBASIC11.33□□□□□ -0.6
Sssca1P56873 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.33□□□□□ -0.6
Sssca1P56873 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sssca1P56873 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sssca1P56873 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Sssca1P56873 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sssca1P56873 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sssca1P56873 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sssca1P56873 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sssca1P56873 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.32□□□□□ -0.6
Sssca1P56873 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.32□□□□□ -0.6
Sssca1P56873 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Sssca1P56873 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms