Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox5P35710 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.31■□□□□ 0.04
Sox5P35710 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox5P35710 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox5P35710 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox5P35710 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox5P35710 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.3■□□□□ 0.04
Sox5P35710 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sox5P35710 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Gm18737-201ENSMUST00000173594 937 ntBASIC15.3■□□□□ 0.04
Sox5P35710 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Sox5P35710 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.3■□□□□ 0.04
Sox5P35710 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.3■□□□□ 0.04
Sox5P35710 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox5P35710 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.3■□□□□ 0.04
Sox5P35710 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox5P35710 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.3■□□□□ 0.04
Sox5P35710 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox5P35710 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox5P35710 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox5P35710 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sox5P35710 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 BC001981-202ENSMUST00000191393 1545 ntBASIC15.29■□□□□ 0.04
Sox5P35710 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.29■□□□□ 0.04
Sox5P35710 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sox5P35710 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox5P35710 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.29■□□□□ 0.04
Sox5P35710 Mir3113-201ENSMUST00000175478 76 ntBASIC15.29■□□□□ 0.04
Sox5P35710 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.29■□□□□ 0.04
Sox5P35710 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.29■□□□□ 0.04
Sox5P35710 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.29■□□□□ 0.04
Sox5P35710 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.29■□□□□ 0.04
Sox5P35710 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox5P35710 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sox5P35710 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox5P35710 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.28■□□□□ 0.04
Sox5P35710 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox5P35710 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Sox5P35710 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms