Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Thbs1P35441 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Gm18515-201ENSMUST00000219755 797 ntBASIC12.99□□□□□ -0.33
Thbs1P35441 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.99□□□□□ -0.33
Thbs1P35441 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Thbs1P35441 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Thbs1P35441 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.99□□□□□ -0.33
Thbs1P35441 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.99□□□□□ -0.33
Thbs1P35441 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Thbs1P35441 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.98□□□□□ -0.33
Thbs1P35441 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Thbs1P35441 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Thbs1P35441 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Thbs1P35441 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.98□□□□□ -0.33
Thbs1P35441 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.98□□□□□ -0.33
Thbs1P35441 Gm2445-201ENSMUST00000182798 989 ntBASIC12.98□□□□□ -0.33
Thbs1P35441 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.98□□□□□ -0.33
Thbs1P35441 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.98□□□□□ -0.33
Thbs1P35441 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.98□□□□□ -0.33
Thbs1P35441 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Thbs1P35441 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Thbs1P35441 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
Thbs1P35441 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs1P35441 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.97□□□□□ -0.33
Thbs1P35441 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Thbs1P35441 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.97□□□□□ -0.33
Thbs1P35441 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Gm24158-201ENSMUST00000175263 71 ntBASIC12.97□□□□□ -0.33
Thbs1P35441 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Gm5312-201ENSMUST00000203728 547 ntBASIC12.97□□□□□ -0.33
Thbs1P35441 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.97□□□□□ -0.33
Thbs1P35441 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.97□□□□□ -0.33
Thbs1P35441 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.97□□□□□ -0.33
Thbs1P35441 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.97□□□□□ -0.33
Thbs1P35441 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Thbs1P35441 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.97□□□□□ -0.33
Thbs1P35441 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Thbs1P35441 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Thbs1P35441 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs1P35441 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs1P35441 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs1P35441 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs1P35441 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs1P35441 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms