Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col2a1P28481 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col2a1P28481 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col2a1P28481 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.71■□□□□ 0.11
Col2a1P28481 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col2a1P28481 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.71■□□□□ 0.11
Col2a1P28481 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Col2a1P28481 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.71■□□□□ 0.1
Col2a1P28481 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.71■□□□□ 0.1
Col2a1P28481 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
Col2a1P28481 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Col2a1P28481 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Col2a1P28481 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.7■□□□□ 0.1
Col2a1P28481 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Gm12742-201ENSMUST00000117326 410 ntBASIC15.7■□□□□ 0.1
Col2a1P28481 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.7■□□□□ 0.1
Col2a1P28481 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.7■□□□□ 0.1
Col2a1P28481 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.7■□□□□ 0.1
Col2a1P28481 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col2a1P28481 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col2a1P28481 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col2a1P28481 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.69■□□□□ 0.1
Col2a1P28481 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Col2a1P28481 Gm14350-201ENSMUST00000116642 640 ntBASIC15.69■□□□□ 0.1
Col2a1P28481 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.69■□□□□ 0.1
Col2a1P28481 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.69■□□□□ 0.1
Col2a1P28481 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Col2a1P28481 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.69■□□□□ 0.1
Col2a1P28481 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col2a1P28481 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col2a1P28481 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Col2a1P28481 Gm11618-201ENSMUST00000117946 267 ntBASIC15.68■□□□□ 0.1
Col2a1P28481 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.68■□□□□ 0.1
Col2a1P28481 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col2a1P28481 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Col2a1P28481 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Col2a1P28481 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.68■□□□□ 0.1
Col2a1P28481 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.68■□□□□ 0.1
Col2a1P28481 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col2a1P28481 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms