Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LINC02012-201ENST00000608206 1725 ntBASIC14.63□□□□□ -0.07
CD40P25942 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.63□□□□□ -0.07
CD40P25942 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD40P25942 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CD40P25942 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CD40P25942 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CD40P25942 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CD40P25942 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CD40P25942 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CD40P25942 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CD40P25942 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CD40P25942 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CD40P25942 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CD40P25942 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.62□□□□□ -0.07
CD40P25942 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CD40P25942 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.62□□□□□ -0.07
CD40P25942 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.62□□□□□ -0.07
CD40P25942 AC091167.2-201ENST00000579581 588 ntBASIC14.62□□□□□ -0.07
CD40P25942 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD40P25942 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.62□□□□□ -0.07
CD40P25942 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CD40P25942 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.61□□□□□ -0.07
CD40P25942 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.61□□□□□ -0.07
CD40P25942 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.61□□□□□ -0.07
CD40P25942 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.61□□□□□ -0.07
CD40P25942 HMGA1P7-201ENST00000406908 502 ntBASIC14.61□□□□□ -0.07
CD40P25942 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
CD40P25942 HCG4-201ENST00000418983 998 ntBASIC14.61□□□□□ -0.07
CD40P25942 CNN2P11-201ENST00000429351 262 ntBASIC14.61□□□□□ -0.07
CD40P25942 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.61□□□□□ -0.07
CD40P25942 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.61□□□□□ -0.07
CD40P25942 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.61□□□□□ -0.07
CD40P25942 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.61□□□□□ -0.07
CD40P25942 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CD40P25942 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CD40P25942 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.61□□□□□ -0.07
CD40P25942 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CD40P25942 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.61□□□□□ -0.07
CD40P25942 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD40P25942 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms