Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.36□□□□□ -0.59
P06323 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
P06323 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.59
P06323 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
P06323 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Gm15427-201ENSMUST00000117288 531 ntBASIC11.36□□□□□ -0.59
P06323 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.36□□□□□ -0.59
P06323 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.36□□□□□ -0.59
P06323 Gm10275-202ENSMUST00000168697 495 ntBASIC11.36□□□□□ -0.59
P06323 Rpph1-201ENSMUST00000175096 319 ntBASIC11.36□□□□□ -0.59
P06323 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.36□□□□□ -0.59
P06323 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Gm10275-201ENSMUST00000092620 635 ntBASIC11.36□□□□□ -0.59
P06323 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
P06323 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.36□□□□□ -0.59
P06323 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
P06323 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
P06323 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06323 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P06323 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P06323 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Gm6973-201ENSMUST00000117080 721 ntBASIC11.35□□□□□ -0.59
P06323 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.35□□□□□ -0.59
P06323 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.35□□□□□ -0.59
P06323 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
P06323 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Mir3113-201ENSMUST00000175478 76 ntBASIC11.35□□□□□ -0.59
P06323 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.35□□□□□ -0.59
P06323 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.35□□□□□ -0.59
P06323 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P06323 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
P06323 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.35□□□□□ -0.59
P06323 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
P06323 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.35□□□□□ -0.59
P06323 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
P06323 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P06323 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P06323 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P06323 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.35□□□□□ -0.59
P06323 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06323 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06323 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06323 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06323 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06323 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06323 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06323 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06323 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P06323 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P06323 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
P06323 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
P06323 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms