Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.32□□□□□ -0.44
P04224 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.32□□□□□ -0.44
P04224 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.32□□□□□ -0.44
P04224 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
P04224 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
P04224 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
P04224 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.32□□□□□ -0.44
P04224 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P04224 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P04224 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
P04224 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
P04224 Gm7222-201ENSMUST00000117512 906 ntBASIC12.31□□□□□ -0.44
P04224 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.31□□□□□ -0.44
P04224 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
P04224 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.31□□□□□ -0.44
P04224 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
P04224 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
P04224 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.31□□□□□ -0.44
P04224 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.31□□□□□ -0.44
P04224 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04224 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.3□□□□□ -0.44
P04224 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P04224 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Gm25990-201ENSMUST00000102440 86 ntBASIC12.3□□□□□ -0.44
P04224 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
P04224 Gm5682-201ENSMUST00000173402 505 ntBASIC12.3□□□□□ -0.44
P04224 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Gm43347-201ENSMUST00000200226 580 ntBASIC12.3□□□□□ -0.44
P04224 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.3□□□□□ -0.44
P04224 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P04224 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.3□□□□□ -0.44
P04224 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
P04224 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
P04224 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P04224 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04224 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.29□□□□□ -0.44
P04224 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
P04224 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04224 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.29□□□□□ -0.44
P04224 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.29□□□□□ -0.44
P04224 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms