Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Syn1O88935 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.39□□□□□ -0.11
Syn1O88935 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syn1O88935 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Syn1O88935 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.38□□□□□ -0.11
Syn1O88935 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.38□□□□□ -0.11
Syn1O88935 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Syn1O88935 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.38□□□□□ -0.11
Syn1O88935 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.38□□□□□ -0.11
Syn1O88935 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Syn1O88935 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Syn1O88935 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.38□□□□□ -0.11
Syn1O88935 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.38□□□□□ -0.11
Syn1O88935 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.38□□□□□ -0.11
Syn1O88935 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Syn1O88935 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.38□□□□□ -0.11
Syn1O88935 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.38□□□□□ -0.11
Syn1O88935 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syn1O88935 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Syn1O88935 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Syn1O88935 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.37□□□□□ -0.11
Syn1O88935 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.37□□□□□ -0.11
Syn1O88935 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.37□□□□□ -0.11
Syn1O88935 Gm15371-201ENSMUST00000117057 784 ntBASIC14.37□□□□□ -0.11
Syn1O88935 Gm1335-201ENSMUST00000121653 386 ntBASIC14.37□□□□□ -0.11
Syn1O88935 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.37□□□□□ -0.11
Syn1O88935 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Syn1O88935 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.37□□□□□ -0.11
Syn1O88935 Gm45865-201ENSMUST00000211815 945 ntBASIC14.37□□□□□ -0.11
Syn1O88935 Nsd1-205ENSMUST00000224693 852 ntBASIC14.37□□□□□ -0.11
Syn1O88935 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Syn1O88935 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.37□□□□□ -0.11
Syn1O88935 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Syn1O88935 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Syn1O88935 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.37□□□□□ -0.11
Syn1O88935 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Syn1O88935 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syn1O88935 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syn1O88935 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syn1O88935 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syn1O88935 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.36□□□□□ -0.11
Syn1O88935 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syn1O88935 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Syn1O88935 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syn1O88935 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syn1O88935 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.36□□□□□ -0.11
Syn1O88935 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syn1O88935 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syn1O88935 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syn1O88935 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.36□□□□□ -0.11
Syn1O88935 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Syn1O88935 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Syn1O88935 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms